Transcript: ENST00000435777.1 COL22A1-201

Description

collagen, type XXII, alpha 1 [Source:HGNC Symbol;Acc:22989]

Location

About this transcript

This transcript has 64 exons, is annotated with 52 domains and features, is associated with 155179 variant alleles and maps to 1283 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303045.6	COL22A1-001	6346	1626aa	ENSP00000303153.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6376	Q8NFW1	NM_152888.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435777.1	COL22A1-201	6285	1606aa	ENSP00000387655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8NFW1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522546.1	COL22A1-007	554	65aa	ENSP00000428244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAX7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000341807.4	COL22A1-003	3584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487854.1	COL22A1-004	697	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517515.1	COL22A1-006	661	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484387.1	COL22A1-002	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 64, Coding exons: 63, Transcript length: 6,285 bps, Translation length: 1,606 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NFW1

Version

ENST00000435777.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.