Transcript: ENST00000487633.1 COL4A3-003

Description

collagen, type IV, alpha 3 (Goodpasture antigen) [Source:HGNC Symbol;Acc:2204]

Location

About this transcript

This transcript has 4 exons, is associated with 2909 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396578.3	COL4A3-001	8097	1670aa	ENSP00000379823.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42829	A9QVI3 Q01955 Q548X1	NM_000091.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000304990.8	COL4A3-004	910	156aa	ENSP00000302781.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXM4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000468753.1	COL4A3-005	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469504.1	COL4A3-002	521	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471862.1	COL4A3-006	755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487633.1	COL4A3-003	524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 524 bps,

Version

ENST00000487633.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331454 (version 1)