Transcript: ENST00000513237.1 TET2-003

Description

tet methylcytosine dioxygenase 2 [Source:HGNC Symbol;Acc:25941]

Gene Synonyms

FLJ20032, KIAA1546, MDS

Location

Chromosome 4: 106,067,450-106,200,973 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 62712 variant alleles and maps to 641 oligo probes.

Gene

This transcript is a product of gene ENSG00000168769.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513237.1	TET2-003	10166	2023aa	ENSP00000425443.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE87 E7EPB1 E7EQS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540549.1	TET2-202	10166	2002aa	ENSP00000442788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47120	D6RE87 E7EPB1 Q6N021	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545826.1	TET2-203	10075	1194aa	ENSP00000442867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE87 Q6N021	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380013.4	TET2-002	9679	2002aa	ENSP00000369351.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47120	D6RE87 E7EPB1 Q6N021	NM_001127208.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000305737.2	TET2-001	9233	1165aa	ENSP00000306705.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3666	D6RE87 Q6N021	NM_017628.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394764.1	TET2-201	9215	1165aa	ENSP00000378245.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3666	D6RE87 Q6N021	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413648.2	TET2-004	4973	1167aa	ENSP00000391448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE87 E7EPB1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514870.1	TET2-006	865	110aa	ENSP00000426885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RE87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000265149.5	TET2-005	9588	1194aa	ENSP00000265149.5	Nonsense mediated decay		D6RE87 Q6N021	-	-
ENST00000504042.1	TET2-007	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505801.1	TET2-008	391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 10,166 bps, Translation length: 2,023 residues

Version

ENST00000513237.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363308 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000513237.1 TET2-003

Summary