Transcript: ENST00000578921.1 RAB31-001

Description

RAB31, member RAS oncogene family [Source:HGNC Symbol;Acc:9771]

Gene Synonyms

RAB22B, Rab22B

Location

Chromosome 18: 9,708,162-9,862,548 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 64841 variant alleles and maps to 573 oligo probes.

Gene

This transcript is a product of gene ENSG00000168461.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000578921.1	RAB31-001	4055	195aa	ENSP00000461945.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45826	Q13636	NM_006868.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578734.1	RAB31-003	783	25aa	ENSP00000462164.2	Nonsense mediated decay		J3KRU3	-	-
ENST00000583137.1	RAB31-002	714	59aa	ENSP00000462561.2	Nonsense mediated decay		J3KSM8	-	-
ENST00000581109.1	RAB31-004	469	74aa	ENSP00000464046.2	Nonsense mediated decay		J3QR51	-	-
ENST00000577284.1	RAB31-005	604	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000583921.1	RAB31-012	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000435762.2	RAB31-010	518	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000580795.1	RAB31-008	342	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578737.1	RAB31-009	328	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577796.1	RAB31-006	295	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000577371.1	RAB31-007	272	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000580361.1	RAB31-011	367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,055 bps, Translation length: 195 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13636

CCDS

This transcript is a member of the Human CCDS set: CCDS45826

Version

ENST00000578921.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000442280 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000578921.1 RAB31-001

Summary