Transcript: ENST00000301761.2 SDHAF2-001

Description

succinate dehydrogenase complex assembly factor 2 [Source:HGNC Symbol;Acc:26034]

Gene Synonyms

C11orf79, FLJ20487, PGL2, SDH5

Location

Chromosome 11: 61,197,545-61,215,001 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 8050 variant alleles and maps to 296 oligo probes.

Gene

This transcript is a product of gene ENSG00000167985.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301761.2	SDHAF2-001	2033	166aa	ENSP00000301761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8007	F5GYJ5 Q9NX18	NM_017841.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542074.1	SDHAF2-006	835	28aa	ENSP00000469670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QY91	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537782.1	SDHAF2-010	559	133aa	ENSP00000469951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYN2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534878.1	SDHAF2-005	523	141aa	ENSP00000471030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R060	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543265.1	SDHAF2-007	438	88aa	ENSP00000443660.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H8E2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542794.1	SDHAF2-003	1077	65aa	ENSP00000439983.1	Nonsense mediated decay		F5H4T4	-	-
ENST00000536250.1	SDHAF2-004	659	65aa	ENSP00000471120.1	Nonsense mediated decay		F5H4T4	-	-
ENST00000359614.5	SDHAF2-011	555	129aa	ENSP00000352630.5	Nonsense mediated decay		F8W679	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,033 bps, Translation length: 166 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NX18

CCDS

This transcript is a member of the Human CCDS set: CCDS8007

Version

ENST00000301761.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000398438 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000301761.2 SDHAF2-001

Summary