Transcript: ENST00000308278.8 FAM57A-001

Description

family with sequence similarity 57, member A [Source:HGNC Symbol;Acc:29646]

Gene Synonyms

CT120, FLJ22282

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 3642 variant alleles and maps to 267 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308278.8	FAM57A-001	2406	257aa	ENSP00000312017.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10996	Q8TBR7	NM_024792.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000301324.8	FAM57A-002	2013	225aa	ENSP00000301324.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TBR7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577008.1	FAM57A-006	867	38aa	ENSP00000460233.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572018.1	FAM57A-005	373	69aa	ENSP00000460150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L336	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570699.1	FAM57A-003	2386	113aa	ENSP00000458649.1	Nonsense mediated decay		I3L183	-	-
ENST00000574327.1	FAM57A-004	852	149aa	ENSP00000458224.1	Nonsense mediated decay		I3L0N4 I3L183	-	-
ENST00000570892.1	FAM57A-007	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,406 bps, Translation length: 257 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TBR7

CCDS

This transcript is a member of the Human CCDS set: CCDS10996

Version

ENST00000308278.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000437155 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.