Transcript: ENST00000301324.8 FAM57A-002

Description

family with sequence similarity 57, member A [Source:HGNC Symbol;Acc:29646]

Gene Synonyms

CT120, FLJ22282

Location

Chromosome 17: 635,824-646,081 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 5342 variant alleles and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSG00000167695.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308278.8	FAM57A-001	2406	257aa	ENSP00000312017.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10996	Q8TBR7	NM_024792.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000301324.8	FAM57A-002	2013	225aa	ENSP00000301324.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TBR7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000577008.1	FAM57A-006	867	38aa	ENSP00000460233.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572018.1	FAM57A-005	373	69aa	ENSP00000460150.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L336	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000570699.1	FAM57A-003	2386	113aa	ENSP00000458649.1	Nonsense mediated decay		I3L183	-	-
ENST00000574327.1	FAM57A-004	852	149aa	ENSP00000458224.1	Nonsense mediated decay		I3L0N4 I3L183	-	-
ENST00000570892.1	FAM57A-007	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,013 bps, Translation length: 225 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TBR7

Version

ENST00000301324.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000437157 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000301324.8 FAM57A-002

Summary