Transcript: ENST00000301071.7 TUBA1A-001

Description

tubulin, alpha 1a [Source:HGNC Symbol;Acc:20766]

Gene Synonyms

B-ALPHA-1, FLJ25113, LIS3, TUBA3

Location

Chromosome 12: 49,578,579-49,583,107 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 36 domains and features, is associated with 2408 variant alleles and maps to 615 oligo probes.

Gene

This transcript is a product of gene ENSG00000167552.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301071.7	TUBA1A-001	1915	451aa	ENSP00000301071.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8781	F8VQQ4 F8VRK0 F8VRZ4 F8VWV9 F8VX09 F8VXZ7 Q71U36	NM_006009.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295766.5	TUBA1A-002	1887	451aa	ENSP00000439020.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58227	F8VQQ4 F8VRK0 F8VRZ4 F8VWV9 F8VX09 F8VXZ7 Q71U36	NM_001270399.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550767.1	TUBA1A-006	1384	416aa	ENSP00000446637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58226	F8VQQ4 F8VRK0 F8VRZ4 F8VWV9 F8VX09 F8VXZ7 Q71U36	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546918.1	TUBA1A-011	984	231aa	ENSP00000446613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXZ7 F8W0F6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547939.1	TUBA1A-009	946	219aa	ENSP00000450268.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VQQ4 F8VRK0 F8VRZ4 F8VWV9 F8VX09 F8VXZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550811.1	TUBA1A-010	650	26aa	ENSP00000449016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000552924.1	TUBA1A-008	628	112aa	ENSP00000448725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VRK0 F8VRZ4 F8VWV9 F8VX09 F8VXZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000550254.1	TUBA1A-014	696	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000548363.1	TUBA1A-015	673	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,915 bps, Translation length: 451 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q71U36

CCDS

This transcript is a member of the Human CCDS set: CCDS8781

Version

ENST00000301071.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000404543 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000301071.7 TUBA1A-001

Summary