Transcript: ENST00000569022.1 FBXO22-004

Description

F-box protein 22 [Source:HGNC Symbol;Acc:13593]

Gene Synonyms

FBX22, FISTC1

Location

Chromosome 15: 76,196,219-76,226,448 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 11906 variant alleles and maps to 567 oligo probes.

Gene

This transcript is a product of gene ENSG00000167196.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000308275.3	FBXO22-001	3483	403aa	ENSP00000307833.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10287	H3BRE0 H3BTR7 H3BUC1 Q8NEZ5	NM_147188.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000453211.2	FBXO22-003	1486	276aa	ENSP00000396442.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45310	H3BRE0 H3BUC1 Q8NEZ5	NM_012170.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000540507.1	FBXO22-201	1402	299aa	ENSP00000439270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTR7 H3BUC1 Q8NEZ5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000569054.1	FBXO22-007	782	160aa	ENSP00000457569.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUC1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565036.1	FBXO22-006	725	241aa	ENSP00000457177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTH6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000564220.1	FBXO22-009	316	78aa	ENSP00000457297.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTR7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569022.1	FBXO22-004	2164	46aa	ENSP00000457531.1	Nonsense mediated decay		Q8NEZ5	-	-
ENST00000569749.1	FBXO22-002	1496	93aa	ENSP00000456198.1	Nonsense mediated decay		H3BRE0	-	-
ENST00000561885.1	FBXO22-008	722	153aa	ENSP00000458022.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565131.1	FBXO22-005	471	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 2,164 bps, Translation length: 46 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEZ5

Version

ENST00000569022.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420646 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000569022.1 FBXO22-004

Summary