Transcript: ENST00000441366.2 EPB42-003

Description

erythrocyte membrane protein band 4.2 [Source:HGNC Symbol;Acc:3381]

Gene Synonyms

E42P, MGC116735, MGC116737, PA, SPH5

Location

Chromosome 15: 43,489,428-43,513,249 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 18 domains and features, is associated with 9993 variant alleles and maps to 464 oligo probes.

Gene

This transcript is a product of gene ENSG00000166947.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300215.3	EPB42-001	4553	721aa	ENSP00000300215.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10093	P16452 Q4VB96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441366.2	EPB42-003	2374	691aa	ENSP00000396616.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45249	P16452 Q4VB96	NM_001114134.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540029.1	EPB42-004	2098	613aa	ENSP00000444699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H563 Q4VB96	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568508.1	EPB42-008	1813	543aa	ENSP00000457140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BTE6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000565459.1	EPB42-006	679	147aa	ENSP00000457757.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000569204.1	EPB42-005	574	191aa	ENSP00000455489.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPV8	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000563128.1	EPB42-009	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000570199.1	EPB42-002	462	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567019.1	EPB42-007	1628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,374 bps, Translation length: 691 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16452

CCDS

This transcript is a member of the Human CCDS set: CCDS45249

Version

ENST00000441366.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000432219 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000441366.2 EPB42-003

Summary