Human (GRCh37.p13)
Description

vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20593]

Gene Synonyms

KIAA0770, TLP, VAM6, hVam6p

Location
About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 646 variant alleles and maps to 102 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000318006.5VPS39-0014844875aaENSP00000326534.5
 
Protein coding
CCDS10083Q96JC1 NM_015289.2GENCODE basic
ENST00000348544.4VPS39-0022661886aaENSP00000335193.5
 
Protein coding
Q96JC1 -GENCODE basic
ENST00000564994.1VPS39-01362947aaENSP00000457325.1
 
Nonsense mediated decay
H3BTU0 -CDS 5' incomplete
ENST00000568357.1VPS39-004593No protein-
 
Processed transcript
---
ENST00000563692.1VPS39-010587No protein-
 
Processed transcript
---
ENST00000562258.1VPS39-0034160No protein-
 
Retained intron
---
ENST00000570062.1VPS39-005842No protein-
 
Retained intron
---
ENST00000568029.1VPS39-006791No protein-
 
Retained intron
---
ENST00000568755.1VPS39-012581No protein-
 
Retained intron
---
ENST00000561797.1VPS39-008545No protein-
 
Retained intron
---
ENST00000561818.1VPS39-009537No protein-
 
Retained intron
---
ENST00000562662.1VPS39-011526No protein-
 
Retained intron
---
ENST00000570023.1VPS39-007337No protein-
 
Retained intron
---
Statistics

Exons: 4, Coding exons: 3, Transcript length: 629 bps, Translation length: 47 residues

Incomplete CDS

CDS 5' incomplete

Version

ENST00000564994.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000420471 (version 1)