Transcript: ENST00000300006.4 C16orf45-001

Description

chromosome 16 open reading frame 45 [Source:HGNC Symbol;Acc:19213]

Gene Synonyms

FLJ32618

Location

Chromosome 16: 15,528,152-15,682,116 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 71909 variant alleles and maps to 366 oligo probes.

Gene

This transcript is a product of gene ENSG00000166780.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000300006.4	C16orf45-001	2404	204aa	ENSP00000300006.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10561	B4DE25 Q96MC5	NM_033201.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452191.2	C16orf45-002	1865	187aa	ENSP00000408976.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45422	B4DE25 Q96MC5	NM_001142469.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566490.1	C16orf45-004	1854	151aa	ENSP00000457867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUY6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564389.1	C16orf45-009	749	175aa	ENSP00000456219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561692.1	C16orf45-010	534	134aa	ENSP00000457515.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BU79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565857.1	C16orf45-013	497	115aa	ENSP00000456084.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561813.1	C16orf45-007	737	88aa	ENSP00000455130.1	Nonsense mediated decay		H3BP34	-	-
ENST00000570249.1	C16orf45-006	622	36aa	ENSP00000457319.1	Nonsense mediated decay		H3BTT5	-	-
ENST00000565913.1	C16orf45-012	934	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563380.1	C16orf45-008	462	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567550.1	C16orf45-011	546	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,404 bps, Translation length: 204 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96MC5

CCDS

This transcript is a member of the Human CCDS set: CCDS10561

Version

ENST00000300006.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000252130 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000300006.4 C16orf45-001

Summary