Transcript: ENST00000360824.3 CASC4-201

Description

cancer susceptibility candidate 4 [Source:HGNC Symbol;Acc:24892]

Gene Synonyms

DKFZp459F1927, H63

Location

Chromosome 15: 44,580,958-44,707,955 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 52967 variant alleles and maps to 412 oligo probes.

Gene

This transcript is a product of gene ENSG00000166734.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299957.6	CASC4-001	3962	436aa	ENSP00000299957.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10108	H0YKJ7 H0YMR0 Q6P4E1	NM_138423.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345795.2	CASC4-002	3764	380aa	ENSP00000335063.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10109	H0YMR0 Q6P4E1	NM_177974.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360824.3	CASC4-201	3673	177aa	ENSP00000354067.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P4E1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000559222.1	CASC4-006	742	112aa	ENSP00000453703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YMR0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558847.1	CASC4-009	622	161aa	ENSP00000453465.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000561305.1	CASC4-011	353	24aa	ENSP00000452833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKJ7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000557945.1	CASC4-005	1386	177aa	ENSP00000453720.1	Nonsense mediated decay		Q6P4E1	-	-
ENST00000558735.1	CASC4-007	427	82aa	ENSP00000453850.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429162.2	CASC4-004	1918	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559151.1	CASC4-010	883	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559037.1	CASC4-008	680	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000559550.1	CASC4-012	264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 4, Transcript length: 3,673 bps, Translation length: 177 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P4E1

Version

ENST00000360824.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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All species

Recent locations

Transcript: ENST00000360824.3 CASC4-201

Summary