Transcript: ENST00000393094.2 CUL5-001

Description

cullin 5 [Source:HGNC Symbol;Acc:2556]

Gene Synonyms

VACM-1, VACM1

Location

About this transcript

This transcript has 19 exons, is annotated with 19 domains and features, is associated with 44868 variant alleles and maps to 875 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393094.2	CUL5-001	6351	780aa	ENSP00000376808.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31668	L0L6C1 L0L6D8 Q93034	NM_003478.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532782.1	CUL5-006	388	130aa	ENSP00000431221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000531427.1	CUL5-003	3596	780aa	ENSP00000435376.1	Nonsense mediated decay	CCDS31668	L0L6C1 L0L6D8 Q93034	-	-
ENST00000532064.1	CUL5-002	1109	47aa	ENSP00000436494.1	Nonsense mediated decay		E9PP19	-	-
ENST00000531843.1	CUL5-005	375	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000526303.1	CUL5-004	751	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 6,351 bps, Translation length: 780 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q93034

CCDS

This transcript is a member of the Human CCDS set: CCDS31668

Version

ENST00000393094.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000389429 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.