Transcript: ENST00000299320.5 C16orf71-001

Description

chromosome 16 open reading frame 71 [Source:HGNC Symbol;Acc:25081]

Gene Synonyms

DKFZp686H2240, FLJ43261

Location

About this transcript

This transcript has 10 exons, is annotated with 3 domains and features, is associated with 9259 variant alleles and maps to 443 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299320.5	C16orf71-001	2722	520aa	ENSP00000299320.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10521	K7ENX3 Q8IYS4	NM_139170.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590191.1	C16orf71-006	2564	537aa	ENSP00000467565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EPW6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000586724.1	C16orf71-004	549	156aa	ENSP00000467133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENX3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000586256.1	C16orf71-003	3705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 2,722 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IYS4

CCDS

This transcript is a member of the Human CCDS set: CCDS10521

Version

ENST00000299320.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251644 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.