Transcript: ENST00000352508.3 RAPSN-002

Description

receptor-associated protein of the synapse [Source:HGNC Symbol;Acc:9863]

Gene Synonyms

CMS1D, CMS1E, RAPSYN, RNF205

Location

About this transcript

This transcript has 6 exons, is annotated with 28 domains and features, is associated with 5784 variant alleles and maps to 316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298854.2	RAPSN-001	1671	412aa	ENSP00000298854.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7936	Q13702	NM_005055.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352508.3	RAPSN-002	1452	353aa	ENSP00000298853.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7937	Q13702	NM_032645.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529341.1	RAPSN-003	1408	353aa	ENSP00000431732.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK11	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524487.1	RAPSN-004	1386	424aa	ENSP00000435551.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJP9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528356.1	RAPSN-005	405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,452 bps, Translation length: 353 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13702

CCDS

This transcript is a member of the Human CCDS set: CCDS7937

Version

ENST00000352508.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000391728 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.