Transcript: ENST00000551340.1 OTOGL-004

Description

otogelin-like [Source:HGNC Symbol;Acc:26901]

Gene Synonyms

C12orf64, DFNB84B, FLJ90579

Location

Chromosome 12: 80,750,262-80,772,639 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 2 domains and features, is associated with 9783 variant alleles and maps to 351 oligo probes.

Gene

This transcript is a product of gene ENSG00000165899.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000458043.2	OTOGL-201	8083	2344aa	ENSP00000400895.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QRK2	NM_173591.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547103.1	OTOGL-001	8032	2332aa	ENSP00000447211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QRK2 Q3ZCN5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298820.3	OTOGL-002	3289	752aa	ENSP00000298820.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000546620.1	OTOGL-003	2360	363aa	ENSP00000449094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QRK2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550182.1	OTOGL-005	908	266aa	ENSP00000449641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YIL4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551340.1	OTOGL-004	2087	166aa	ENSP00000449296.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 7, Transcript length: 2,087 bps, Translation length: 166 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000551340.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407441 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000551340.1 OTOGL-004

Summary