Transcript: ENST00000546620.1 OTOGL-003

Description

otogelin-like [Source:HGNC Symbol;Acc:26901]

Gene Synonyms

C12orf64, DFNB84B, FLJ90579

Location

Chromosome 12: 80,750,134-80,772,870 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 4 domains and features, is associated with 9933 variant alleles and maps to 332 oligo probes.

Gene

This transcript is a product of gene ENSG00000165899.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000458043.2	OTOGL-201	8083	2344aa	ENSP00000400895.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QRK2	NM_173591.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000547103.1	OTOGL-001	8032	2332aa	ENSP00000447211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QRK2 Q3ZCN5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000298820.3	OTOGL-002	3289	752aa	ENSP00000298820.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000546620.1	OTOGL-003	2360	363aa	ENSP00000449094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E2QRK2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550182.1	OTOGL-005	908	266aa	ENSP00000449641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YIL4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551340.1	OTOGL-004	2087	166aa	ENSP00000449296.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,360 bps, Translation length: 363 residues

Version

ENST00000546620.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000407440 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000546620.1 OTOGL-003

Summary