Transcript: ENST00000298466.5 SOHLH1-001

Description

spermatogenesis and oogenesis specific basic helix-loop-helix 1 [Source:HGNC Symbol;Acc:27845]

Gene Synonyms

C9orf157, NOHLH, SPATA27, TEB2, bA100C15.3, bHLHe80

Location

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 4321 variant alleles and maps to 316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298466.5	SOHLH1-001	1987	328aa	ENSP00000298466.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35174	Q5JUK2	NM_001012415.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425225.1	SOHLH1-201	1411	387aa	ENSP00000404438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48054	Q5JUK2	NM_001101677.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,987 bps, Translation length: 328 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JUK2

CCDS

This transcript is a member of the Human CCDS set: CCDS35174

Version

ENST00000298466.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055018 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.