Transcript: ENST00000378572.3 PRPF18-001

Description

pre-mRNA processing factor 18 [Source:HGNC Symbol;Acc:17351]

Gene Synonyms

HPRP18, PRP18, hPrp18

Location

About this transcript

This transcript has 10 exons, is annotated with 8 domains and features, is associated with 19315 variant alleles and maps to 501 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378572.3	PRPF18-001	1717	342aa	ENSP00000367835.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7100	M0QXX3 Q99633	NM_003675.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417658.1	PRPF18-003	1062	249aa	ENSP00000392142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9P7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000320054.4	PRPF18-002	788	167aa	ENSP00000367824.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T9P8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,717 bps, Translation length: 342 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99633

CCDS

This transcript is a member of the Human CCDS set: CCDS7100

Version

ENST00000378572.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000046879 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.