Transcript: ENST00000376893.3 SSX3-002

Description

synovial sarcoma, X breakpoint 3 [Source:HGNC Symbol;Acc:11337]

Gene Synonyms

CT5.3

Location

About this transcript

This transcript has 8 exons, is annotated with 5 domains and features, is associated with 3545 variant alleles and maps to 558 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298396.2	SSX3-001	1232	188aa	ENSP00000298396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14291	Q99909	NM_021014.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376893.3	SSX3-002	800	170aa	ENSP00000366090.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99909	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000376895.1	SSX3-003	799	100aa	ENSP00000366092.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JQZ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 8, Coding exons: 6, Transcript length: 800 bps, Translation length: 170 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99909

Version

ENST00000376893.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000056487 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.