Transcript: ENST00000456522.1 PTCHD1-001

Description

patched domain containing 1 [Source:HGNC Symbol;Acc:26392]

Gene Synonyms

FLJ30296

Location

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 20417 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379361.4	PTCHD1-002	13714	888aa	ENSP00000368666.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35215	Q96NR3	NM_173495.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000456522.1	PTCHD1-001	736	103aa	ENSP00000406663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 736 bps, Translation length: 103 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000456522.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000056046 (version 2)