Transcript: ENST00000374736.3 ABCA1-002

Description

ATP-binding cassette, sub-family A (ABC1), member 1 [Source:HGNC Symbol;Acc:29]

Gene Synonyms

ABC-1, ABC1, CERP, HDLDT1, TGD

Location

About this transcript

This transcript has 50 exons, is annotated with 35 domains and features, is associated with 64194 variant alleles and maps to 1451 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374736.3	ABCA1-002	10494	2261aa	ENSP00000363868.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6762	O95477 Q9H002 Q9NP93 Q9NS76	NM_005502.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423487.2	ABCA1-001	1540	363aa	ENSP00000416623.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMI2 Q9H002 Q9NP93 Q9NS76	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374733.1	ABCA1-004	923	123aa	ENSP00000363865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AMI1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000494467.1	ABCA1-003	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 50, Coding exons: 49, Transcript length: 10,494 bps, Translation length: 2,261 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95477

CCDS

This transcript is a member of the Human CCDS set: CCDS6762

Version

ENST00000374736.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000053491 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.