Transcript: ENST00000297440.6 HEATR2-001

Description

HEAT repeat containing 2 [Source:HGNC Symbol;Acc:26013]

Gene Synonyms

CILD18, FLJ20397, FLJ25564, FLJ31671, FLJ39381

Location

Chromosome 7: 766,338-826,112 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 17 domains and features, is associated with 35545 variant alleles and maps to 653 oligo probes.

Gene

This transcript is a product of gene ENSG00000164818.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297440.6	HEATR2-001	3410	855aa	ENSP00000297440.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34580	Q86Y56	NM_017802.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000313147.5	HEATR2-201	2552	843aa	ENSP00000321451.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86Y56	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440747.1	HEATR2-002	2350	657aa	ENSP00000403165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000403952.3	HEATR2-005	1907	280aa	ENSP00000384884.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PGY2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437419.1	HEATR2-006	585	195aa	ENSP00000410788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000438961.1	HEATR2-007	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486546.1	HEATR2-008	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491496.1	HEATR2-004	2573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461576.1	HEATR2-009	298	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,410 bps, Translation length: 855 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86Y56

CCDS

This transcript is a member of the Human CCDS set: CCDS34580

Version

ENST00000297440.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322542 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000297440.6 HEATR2-001

Summary