Transcript: ENST00000348904.3 C7orf57-001

Description

chromosome 7 open reading frame 57 [Source:HGNC Symbol;Acc:22247]

Location

Chromosome 7: 48,075,117-48,100,894 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 4 domains and features, is associated with 11695 variant alleles and maps to 313 oligo probes.

Gene

This transcript is a product of gene ENSG00000164746.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348904.3	C7orf57-001	2125	295aa	ENSP00000335500.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47583	Q8NEG2	NM_001100159.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539619.1	C7orf57-201	2122	295aa	ENSP00000442474.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7J8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000430738.1	C7orf57-003	2056	340aa	ENSP00000410944.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQX6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420324.1	C7orf57-004	1957	324aa	ENSP00000394648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JQZ6	NM_001267865.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435376.1	C7orf57-002	1925	153aa	ENSP00000391652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59054	Q8NEG2	NM_001267866.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461741.1	C7orf57-005	492	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 2,125 bps, Translation length: 295 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEG2

CCDS

This transcript is a member of the Human CCDS set: CCDS47583

Version

ENST00000348904.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000341745 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000348904.3 C7orf57-001

Summary