Transcript: ENST00000506135.1 EGFLAM-009

Description

EGF-like, fibronectin type III and laminin G domains [Source:HGNC Symbol;Acc:26810]

Gene Synonyms

AGRINL, AGRNL, FLJ39155

Location

Chromosome 5: 38,445,673-38,464,239 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 8087 variant alleles and maps to 261 oligo probes.

Gene

This transcript is a product of gene ENSG00000164318.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322350.5	EGFLAM-001	4411	1009aa	ENSP00000313084.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3924	D6RJD2 Q63HQ2	NM_152403.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354891.3	EGFLAM-004	3963	1017aa	ENSP00000346964.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56363	D6RJD2 Q63HQ2	NM_001205301.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336740.6	EGFLAM-002	3071	775aa	ENSP00000337607.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3925	D6RJD2 Q63HQ2	NM_182798.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397202.2	EGFLAM-003	2398	375aa	ENSP00000380385.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJD2 Q63HQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397210.3	EGFLAM-005	1299	152aa	ENSP00000380393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47199	D6RJD2 Q63HQ2	NM_182801.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506135.1	EGFLAM-009	889	152aa	ENSP00000425579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47199	D6RJD2 Q63HQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514476.1	EGFLAM-010	676	152aa	ENSP00000423228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47199	D6RJD2 Q63HQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508131.1	EGFLAM-008	552	112aa	ENSP00000427228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504709.1	EGFLAM-012	821	47aa	ENSP00000426437.1	Nonsense mediated decay		D6RG24	-	-
ENST00000513131.1	EGFLAM-011	1140	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508868.1	EGFLAM-007	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 889 bps, Translation length: 152 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q63HQ2

CCDS

This transcript is a member of the Human CCDS set: CCDS47199

Version

ENST00000506135.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000367328 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000506135.1 EGFLAM-009

Summary