Transcript: ENST00000397202.2 EGFLAM-003

Description

EGF-like, fibronectin type III and laminin G domains [Source:HGNC Symbol;Acc:26810]

Gene Synonyms

AGRINL, AGRNL, FLJ39155

Location

Chromosome 5: 38,403,650-38,464,651 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 19 domains and features, is associated with 26694 variant alleles and maps to 448 oligo probes.

Gene

This transcript is a product of gene ENSG00000164318.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322350.5	EGFLAM-001	4411	1009aa	ENSP00000313084.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3924	D6RJD2 Q63HQ2	NM_152403.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354891.3	EGFLAM-004	3963	1017aa	ENSP00000346964.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56363	D6RJD2 Q63HQ2	NM_001205301.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336740.6	EGFLAM-002	3071	775aa	ENSP00000337607.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3925	D6RJD2 Q63HQ2	NM_182798.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397202.2	EGFLAM-003	2398	375aa	ENSP00000380385.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJD2 Q63HQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397210.3	EGFLAM-005	1299	152aa	ENSP00000380393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47199	D6RJD2 Q63HQ2	NM_182801.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506135.1	EGFLAM-009	889	152aa	ENSP00000425579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47199	D6RJD2 Q63HQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514476.1	EGFLAM-010	676	152aa	ENSP00000423228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47199	D6RJD2 Q63HQ2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508131.1	EGFLAM-008	552	112aa	ENSP00000427228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJD2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504709.1	EGFLAM-012	821	47aa	ENSP00000426437.1	Nonsense mediated decay		D6RG24	-	-
ENST00000513131.1	EGFLAM-011	1140	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000508868.1	EGFLAM-007	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 2,398 bps, Translation length: 375 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q63HQ2

Version

ENST00000397202.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253826 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000397202.2 EGFLAM-003

Summary