Transcript: ENST00000461680.1 RAD54L2-002

Description

RAD54-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:29123]

Gene Synonyms

ARIP4, HSPC325, KIAA0809, SRISNF2L

Location

Chromosome 3: 51,664,338-51,697,610 forward strand.

About this transcript

This transcript has 17 exons, is associated with 13577 variant alleles and maps to 525 oligo probes.

Gene

This transcript is a product of gene ENSG00000164080.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409535.2	RAD54L2-001	9776	1467aa	ENSP00000386520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33765	E7EU19 Q9Y4B4	NM_015106.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432863.1	RAD54L2-005	3926	1296aa	ENSP00000410283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EU19	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000296477.3	RAD54L2-201	3926	1161aa	ENSP00000296477.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EU19	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461680.1	RAD54L2-002	5129	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487093.1	RAD54L2-003	4782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462377.1	RAD54L2-004	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000602430.1	RAD54L2-006	727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 0, Transcript length: 5,129 bps,

Version

ENST00000461680.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000328701 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000461680.1 RAD54L2-002

Summary