Transcript: ENST00000468525.1 MST1R-006

Description

macrophage stimulating 1 receptor (c-met-related tyrosine kinase) [Source:HGNC Symbol;Acc:7381]

Gene Synonyms

CD136, CDw136, PTK8, RON

Location

Chromosome 3: 49,933,553-49,941,042 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 4938 variant alleles and maps to 400 oligo probes.

Gene

This transcript is a product of gene ENSG00000164078.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296474.3	MST1R-001	4536	1400aa	ENSP00000296474.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2807	Q04912	NM_002447.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344206.4	MST1R-002	4198	1351aa	ENSP00000341325.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58833	Q04912	NM_001244937.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434765.1	MST1R-011	854	285aa	ENSP00000393294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000440292.1	MST1R-010	810	270aa	ENSP00000414792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000411578.2	MST1R-007	4683	1032aa	ENSP00000407926.2	Nonsense mediated decay		J3KQS7	-	-
ENST00000468525.1	MST1R-006	2727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000485044.1	MST1R-005	1944	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493535.1	MST1R-004	1626	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497001.1	MST1R-003	1488	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463789.1	MST1R-013	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467110.1	MST1R-009	542	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490053.1	MST1R-012	341	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 2,727 bps,

Version

ENST00000468525.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000345408 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000468525.1 MST1R-006

Summary