Transcript: ENST00000504491.1 INTU-005

Description

inturned planar cell polarity protein [Source:HGNC Symbol;Acc:29239]

Gene Synonyms

INT, KIAA1284, PDZD6, PDZK6

Location

Chromosome 4: 128,544,426-128,565,191 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 3 domains and features, is associated with 4831 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSG00000164066.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335251.6	INTU-003	13233	942aa	ENSP00000334003.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34061	B3KVS6 Q9ULD6	NM_015693.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296461.5	INTU-201	1297	408aa	ENSP00000296461.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9ULD6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504491.1	INTU-005	737	201aa	ENSP00000422550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QTA5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506283.1	INTU-008	290	96aa	ENSP00000426171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA54	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000503626.1	INTU-004	5740	408aa	ENSP00000426287.1	Nonsense mediated decay		Q9ULD6	-	-
ENST00000503952.1	INTU-002	3006	435aa	ENSP00000421995.1	Nonsense mediated decay		Q9ULD6	-	-
ENST00000510766.1	INTU-009	483	93aa	ENSP00000427150.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512995.1	INTU-007	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504276.1	INTU-006	647	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 737 bps, Translation length: 201 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000504491.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000364149 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000504491.1 INTU-005

Summary