Transcript: ENST00000426414.2 WDFY3-003

Description

WD repeat and FYVE domain containing 3 [Source:HGNC Symbol;Acc:20751]

Gene Synonyms

ALFY, KIAA0993, ZFYVE25

Location

Chromosome 4: 85,730,019-85,818,094 reverse strand.

About this transcript

This transcript has 12 exons, is associated with 37236 variant alleles and maps to 431 oligo probes.

Gene

This transcript is a product of gene ENSG00000163625.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322366.6	WDFY3-201	14255	3509aa	ENSP00000318466.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A7E1Z6 D6RJE4 H0Y9T6 Q8IZQ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295888.4	WDFY3-001	14247	3526aa	ENSP00000295888.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3609	A7E1Z6 D6RJE4 Q8IZQ1	NM_014991.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514711.1	WDFY3-013	1918	639aa	ENSP00000424987.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9T6	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000509172.1	WDFY3-005	453	60aa	ENSP00000425699.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJE4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000502713.1	WDFY3-006	425	9aa	ENSP00000422741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514071.1	WDFY3-004	240	80aa	ENSP00000426813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000512267.1	WDFY3-008	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505923.1	WDFY3-011	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000426414.2	WDFY3-003	3428	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000425179.2	WDFY3-002	1910	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000509825.1	WDFY3-009	783	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504839.1	WDFY3-010	677	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000504990.1	WDFY3-007	505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 0, Transcript length: 3,428 bps,

Version

ENST00000426414.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363030 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000426414.2 WDFY3-003

Summary