Transcript: ENST00000485134.1 PYHIN1-007

Description

pyrin and HIN domain family, member 1 [Source:HGNC Symbol;Acc:28894]

Gene Synonyms

IFIX, MGC23885, RP11-520H16.1

Location

Chromosome 1: 158,911,767-158,915,181 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1683 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000163564.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000368140.1	PYHIN1-001	2083	492aa	ENSP00000357122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1178	Q6K0P9	NM_198929.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368138.3	PYHIN1-002	1723	483aa	ENSP00000357120.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1179	Q6K0P9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368135.4	PYHIN1-005	1662	245aa	ENSP00000357117.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6K0P9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392254.2	PYHIN1-003	1624	461aa	ENSP00000376083.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30907	Q6K0P9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392252.3	PYHIN1-004	1597	452aa	ENSP00000376082.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30908	Q6K0P9	NM_198930.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458222.1	PYHIN1-006	771	150aa	ENSP00000407616.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000485134.1	PYHIN1-007	1129	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,129 bps,

Version

ENST00000485134.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000090116 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000485134.1 PYHIN1-007

Summary