Transcript: ENST00000313350.6 CLASP2-007

Description

cytoplasmic linker associated protein 2 [Source:HGNC Symbol;Acc:17078]

Gene Synonyms

KIAA0627

Location

Chromosome 3: 33,643,905-33,686,984 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 7 domains and features, is associated with 17515 variant alleles and maps to 376 oligo probes.

Gene

This transcript is a product of gene ENSG00000163539.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000399362.4	CLASP2-002	7282	1513aa	ENSP00000382297.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7ERI8 Q07A20 Q6N029	NM_015097.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307312.7	CLASP2-201	7257	995aa	ENSP00000304743.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PBA6 Q96F87	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359576.5	CLASP2-202	7254	1505aa	ENSP00000352581.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H604 Q07A20	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468888.2	CLASP2-001	6978	1514aa	ENSP00000419974.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2RTR1 E7EW49 Q07A20 Q6N029	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539981.1	CLASP2-203	6234	1063aa	ENSP00000439039.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F5H3X0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480013.1	CLASP2-003	5972	1293aa	ENSP00000417518.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	J3KR49	NM_001207044.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461133.3	CLASP2-010	4814	1273aa	ENSP00000419305.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E3W994 E9PBA6 Q96F87	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000333778.6	CLASP2-008	1989	458aa	ENSP00000327760.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7ENG2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487200.1	CLASP2-006	1940	454aa	ENSP00000418939.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3KR06 D6RBU8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000313350.6	CLASP2-007	1597	431aa	ENSP00000324364.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6RBU8 O75122	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485378.2	CLASP2-025	874	233aa	ENSP00000418945.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D6RBU8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487553.1	CLASP2-018	825	220aa	ENSP00000420307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000496954.2	CLASP2-024	685	178aa	ENSP00000418411.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9J668	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000480385.1	CLASP2-021	614	205aa	ENSP00000417386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000475576.1	CLASP2-023	536	178aa	ENSP00000417666.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H7C4M5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000476251.1	CLASP2-017	1097	184aa	ENSP00000418488.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482896.1	CLASP2-013	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000476433.1	CLASP2-016	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000498331.1	CLASP2-014	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000464961.1	CLASP2-009	6273	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000462878.1	CLASP2-012	892	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000493577.1	CLASP2-020	875	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000494261.1	CLASP2-019	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000486796.1	CLASP2-015	656	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000491045.1	CLASP2-022	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000467956.1	CLASP2-011	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,597 bps, Translation length: 431 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75122

Version

ENST00000313350.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000356543 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

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Recent locations

Transcript: ENST00000313350.6 CLASP2-007

Summary