Transcript: ENST00000295373.6 DHX57-001

Description

DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:HGNC Symbol;Acc:20086]

Gene Synonyms

DDX57

Location

Chromosome 2: 39,024,871-39,103,049 reverse strand.

About this transcript

This transcript has 24 exons, is annotated with 33 domains and features, is associated with 39959 variant alleles and maps to 790 oligo probes.

Gene

This transcript is a product of gene ENSG00000163214.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295373.6	DHX57-001	4858	1386aa	ENSP00000295373.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1800	B4DKW2 C9J207 Q6P158	NM_198963.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452978.1	DHX57-010	2559	665aa	ENSP00000397841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000417233.1	DHX57-005	547	106aa	ENSP00000400702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J207	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000442331.1	DHX57-011	455	51aa	ENSP00000387404.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZ23	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457308.1	DHX57-002	4109	472aa	ENSP00000405111.1	Nonsense mediated decay		C9J207 F8WAZ3	-	-
ENST00000479345.2	DHX57-007	1835	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492042.1	DHX57-008	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460193.1	DHX57-003	5518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474104.1	DHX57-004	4016	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497514.2	DHX57-006	584	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477981.1	DHX57-012	400	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 4,858 bps, Translation length: 1,386 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P158

CCDS

This transcript is a member of the Human CCDS set: CCDS1800

Version

ENST00000295373.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000219940 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000295373.6 DHX57-001

Summary