Transcript: ENST00000382723.4 MSX1-001

Description

msh homeobox 1 [Source:HGNC Symbol;Acc:7391]

Gene Synonyms

ECTD3, HOX7, HYD1, OFC5, STHAG1

Location

About this transcript

This transcript has 2 exons, is annotated with 15 domains and features, is associated with 3028 variant alleles and maps to 412 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000382723.4	MSX1-001	1939	303aa	ENSP00000372170.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3378	A0SZU5 E9KXS6 E9KXS7 E9KXS8 E9KXS9 E9KXT0 E9KXT1 E9KXT2 E9KXT3 E9KXT4 E9KXT5 E9KXT6 E9KXT7 E9KXT8 E9KXT9 E9KXU0 E9KXU1 E9KXU2 E9KXU3 E9KXU4 E9KXU5 E9KXU6 E9KXU7 E9KXU8 E9KXU9 E9KXV0 E9KXV1 E9KXV2 E9KXV3 E9KXV4 E9KXV5 E9KXV6 E9KXV7 E9KXV8 E9KXV9 E9KXW0 E9KXW1 E9KXW2 E9KXW3 E9KXW4 E9KXW5 E9KXW6 E9KXW7 E9KXW8 E9KXW9 E9KXX0 E9KXX1 E9KXX2 E9KXX3 E9KXX4 E9KXX5 E9KXX6 E9KXX7 E9KXX8 E9KXX9 E9KXY0 E9KXY1 E9KXY2 E9KXY3 E9KXY4 E9KXY5 E9KXY6 E9KXY7 E9KXY8 E9KXY9 E9KXZ0 E9KXZ1 E9KXZ2 E9KXZ3 E9KXZ4 E9KXZ5 E9KXZ6 E9KXZ7 E9KXZ8 E9KXZ9 E9KY00 E9KY01 E9KY02 E9KY03 E9KY04 E9KY05 E9KY06 E9KY07 E9KY08 E9KY09 E9KY10 E9KY11 E9KY12 E9KY13 E9KY14 E9KY15 E9KY16 E9KY17 E9KY18 E9KY19 P28360	NM_002448.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468421.1	MSX1-002	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,939 bps, Translation length: 303 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28360

CCDS

This transcript is a member of the Human CCDS set: CCDS3378

Version

ENST00000382723.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000206700 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.