Transcript: ENST00000366697.2 TRIM17-003

Description

tripartite motif containing 17 [Source:HGNC Symbol;Acc:13430]

Gene Synonyms

RBCC, RNF16, TERF, terf

Location

Chromosome 1: 228,595,641-228,603,730 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 28 domains and features, is associated with 3978 variant alleles and maps to 407 oligo probes.

Gene

This transcript is a product of gene ENSG00000162931.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000366697.2	TRIM17-003	2652	477aa	ENSP00000355658.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1571	E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000366698.2	TRIM17-001	1748	477aa	ENSP00000355659.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1571	E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	NM_016102.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456946.2	TRIM17-006	1731	343aa	ENSP00000403312.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44327	B7ZAR4 E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	NM_001134855.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000295033.3	TRIM17-002	1730	477aa	ENSP00000295033.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1571	E5RI62 E5RJW6 J3KNZ3 J3KQG0 Q9Y577	NM_001024940.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479800.1	TRIM17-004	925	267aa	ENSP00000430468.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJW6 J3KQG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000355586.4	TRIM17-009	808	175aa	ENSP00000347794.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RI62 J3KNZ3 J3KQG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457345.2	TRIM17-008	575	30aa	ENSP00000397688.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KQG0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520264.1	TRIM17-007	551	50aa	ENSP00000429555.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RI62	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,652 bps, Translation length: 477 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y577

CCDS

This transcript is a member of the Human CCDS set: CCDS1571

Version

ENST00000366697.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000096439 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000366697.2 TRIM17-003

Summary