Transcript: ENST00000434648.1 CAPN2-009

Description

calpain 2, (m/II) large subunit [Source:HGNC Symbol;Acc:1479]

Gene Synonyms

CANP2, CANPL2, CANPml, mCANP

Location

Chromosome 1: 223,889,347-223,934,765 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 19414 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSG00000162909.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295006.5	CAPN2-001	3573	700aa	ENSP00000295006.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31035	P17655	NM_001748.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433674.2	CAPN2-201	3264	622aa	ENSP00000413158.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53478	C9JWY7 P17655	NM_001146068.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434648.1	CAPN2-009	577	131aa	ENSP00000399949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWY7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474026.1	CAPN2-002	4130	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487223.1	CAPN2-003	2991	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463997.1	CAPN2-005	2547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498027.1	CAPN2-004	1405	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472601.1	CAPN2-008	625	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492664.1	CAPN2-007	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480581.1	CAPN2-006	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483579.1	CAPN2-010	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492565.1	CAPN2-011	331	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 577 bps, Translation length: 131 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000434648.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000090981 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000434648.1 CAPN2-009

Summary