Transcript: ENST00000367714.3 SLC9C2-001

Description

solute carrier family 9, member C2 (putative) [Source:HGNC Symbol;Acc:28664]

Gene Synonyms

MGC43026, RP3-436N22.2, SLC9A11

Location

About this transcript

This transcript has 28 exons, is annotated with 26 domains and features, is associated with 40321 variant alleles and maps to 765 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367714.3	SLC9C2-001	4428	1124aa	ENSP00000356687.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1308	F5H342 Q5TAH2	NM_178527.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536496.1	SLC9C2-201	2237	450aa	ENSP00000445437.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H342	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000466087.1	SLC9C2-003	3333	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479367.1	SLC9C2-004	760	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476568.1	SLC9C2-005	230	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 4,428 bps, Translation length: 1,124 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5TAH2

CCDS

This transcript is a member of the Human CCDS set: CCDS1308

Version

ENST00000367714.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000084205 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.