Transcript: ENST00000466914.2 KCNT2-004

Description

potassium channel, subfamily T, member 2 [Source:HGNC Symbol;Acc:18866]

Gene Synonyms

KCa4.2, SLICK, SLO2.1

Location

Chromosome 1: 196,309,619-196,397,337 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 3 domains and features, is associated with 40578 variant alleles and maps to 143 oligo probes.

Gene

This transcript is a product of gene ENSG00000162687.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367433.5	KCNT2-002	5883	1111aa	ENSP00000356403.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6UVM3	NM_198503.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367431.4	KCNT2-201	5753	1069aa	ENSP00000356401.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G8JLE3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000294725.9	KCNT2-001	4409	1135aa	ENSP00000294725.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1384	A9LNM6 Q6UVM3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000609185.1	KCNT2-006	3622	1068aa	ENSP00000476657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451324.2	KCNT2-202	3146	370aa	ENSP00000405474.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q3SY61	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000466914.2	KCNT2-004	695	169aa	ENSP00000477456.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498426.1	KCNT2-003	5157	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000610076.1	KCNT2-005	3462	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 695 bps, Translation length: 169 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000466914.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000087262 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000466914.2 KCNT2-004

Summary