Transcript: ENST00000479111.1 TYW3-003

Description

tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24757]

Gene Synonyms

C1orf171, FLJ40918

Location

Chromosome 1: 75,198,931-75,230,084 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 13243 variant alleles and maps to 377 oligo probes.

Gene

This transcript is a product of gene ENSG00000162623.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370867.3	TYW3-001	3430	259aa	ENSP00000359904.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS666	Q6IPR3	NM_138467.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457880.2	TYW3-202	3335	226aa	ENSP00000407025.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53334	Q6IPR3	NM_001162916.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479111.1	TYW3-003	1130	139aa	ENSP00000477469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000421739.2	TYW3-201	943	175aa	ENSP00000409336.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFU6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483990.1	TYW3-004	708	56aa	ENSP00000476365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467646.1	TYW3-002	653	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000449696.3	TYW3-007	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486467.1	TYW3-005	551	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485401.1	TYW3-006	513	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,130 bps, Translation length: 139 residues

Version

ENST00000479111.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000026575 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000479111.1 TYW3-003

Summary