Transcript: ENST00000588918.1 MFSD12-004

Description

major facilitator superfamily domain containing 12 [Source:HGNC Symbol;Acc:28299]

Gene Synonyms

C19orf28, MGC20700, PP3501

Location

Chromosome 19: 3,544,197-3,557,561 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 9471 variant alleles and maps to 376 oligo probes.

Gene

This transcript is a product of gene ENSG00000161091.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355415.2	MFSD12-001	2124	480aa	ENSP00000347583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42465	Q6NUT3	NM_174983.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398558.4	MFSD12-011	2104	538aa	ENSP00000381566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42464	Q6NUT3	NM_021731.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389395.3	MFSD12-005	1916	473aa	ENSP00000374046.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42463	Q6NUT3	NM_001042680.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589995.1	MFSD12-006	777	259aa	ENSP00000465302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EJS5	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000589063.1	MFSD12-007	590	180aa	ENSP00000467635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQ22	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000592652.1	MFSD12-008	486	147aa	ENSP00000466906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENE1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000588918.1	MFSD12-004	2040	471aa	ENSP00000467207.1	Nonsense mediated decay		Q6NUT3	-	-
ENST00000585814.1	MFSD12-009	1002	71aa	ENSP00000465782.1	Nonsense mediated decay		K7EKU1	-	-
ENST00000588626.1	MFSD12-014	525	53aa	ENSP00000468287.1	Nonsense mediated decay		K7ERJ8	-	-
ENST00000591878.1	MFSD12-010	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000586402.1	MFSD12-015	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585788.1	MFSD12-013	1769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589157.1	MFSD12-012	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,040 bps, Translation length: 471 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6NUT3

Version

ENST00000588918.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000453014 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000588918.1 MFSD12-004

Summary