Transcript: ENST00000292609.4 PGLYRP2-002

Description

peptidoglycan recognition protein 2 [Source:HGNC Symbol;Acc:30013]

Gene Synonyms

HMFT0141, PGLYRPL, PGRP-L, PGRPL, TAGL-like, tagL, tagL-alpha, tagl-beta

Location

About this transcript

This transcript has 4 exons, is annotated with 10 domains and features, is associated with 5729 variant alleles and maps to 304 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000292609.4	PGLYRP2-002	2758	634aa	ENSP00000292609.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYW3 M0R2W8 Q96PD5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340880.4	PGLYRP2-001	2230	576aa	ENSP00000345968.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12330	M0QYW3 M0R2W8 Q96PD5	NM_052890.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000594637.1	PGLYRP2-004	651	105aa	ENSP00000470112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYW3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000601792.1	PGLYRP2-003	578	181aa	ENSP00000472856.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0QYW3 M0R2W8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,758 bps, Translation length: 634 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96PD5

Version

ENST00000292609.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000461335 (version 2)

Annotation Attributes

retained intron final [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.