Transcript: ENST00000464750.1 U2AF1-003

Description

U2 small nuclear RNA auxiliary factor 1 [Source:HGNC Symbol;Acc:12453]

Gene Synonyms

FP793, RN, RNU2AF1, U2AF35, U2AFBP

Location

Chromosome 21: 44,513,066-44,527,634 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 4650 variant alleles and maps to 372 oligo probes.

Gene

This transcript is a product of gene ENSG00000160201.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000459639.1	U2AF1-004	1675	167aa	ENSP00000418705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42948	Q01081	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398137.1	U2AF1-201	1019	167aa	ENSP00000381205.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42948	Q01081	NM_001025204.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000291552.4	U2AF1-001	962	240aa	ENSP00000291552.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13694	Q01081	NM_006758.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380276.2	U2AF1-002	940	240aa	ENSP00000369629.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33574	Q01081 Q69YM7	NM_001025203.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000464750.1	U2AF1-003	966	75aa	ENSP00000420672.1	Nonsense mediated decay		Q01081	-	-
ENST00000486519.1	U2AF1-010	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475639.1	U2AF1-005	4694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496462.1	U2AF1-006	3973	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478282.1	U2AF1-007	3344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471250.1	U2AF1-008	1676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468039.1	U2AF1-011	609	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463599.1	U2AF1-009	338	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 966 bps, Translation length: 75 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01081

Version

ENST00000464750.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000195543 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000464750.1 U2AF1-003

Summary