Transcript: ENST00000446634.1 ZYX-003

Description

zyxin [Source:HGNC Symbol;Acc:13200]

Gene Synonyms

ESP-2, HED-2

Location

Chromosome 7: 143,080,093-143,085,989 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features, is associated with 3045 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSG00000159840.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322764.5	ZYX-001	2493	572aa	ENSP00000324422.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5883	B4DQX7 C9IZ41 Q15942	NM_003461.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392910.2	ZYX-007	2123	415aa	ENSP00000376642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQX7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354434.4	ZYX-006	2050	540aa	ENSP00000346417.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQR8 H0Y2Y8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449423.2	ZYX-201	2050	485aa	ENSP00000394158.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQR8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446634.1	ZYX-003	926	171aa	ENSP00000403714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJK5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457235.1	ZYX-010	703	164aa	ENSP00000400537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449630.1	ZYX-005	533	177aa	ENSP00000413467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3R3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000436448.1	ZYX-009	632	176aa	ENSP00000411230.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477373.1	ZYX-008	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468083.1	ZYX-002	1146	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497119.1	ZYX-004	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 926 bps, Translation length: 171 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000446634.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000156298 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000446634.1 ZYX-003

Summary