Transcript: ENST00000392910.2 ZYX-007

Description

zyxin [Source:HGNC Symbol;Acc:13200]

Gene Synonyms

ESP-2, HED-2

Location

Chromosome 7: 143,079,000-143,088,202 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 23 domains and features, is associated with 4818 variant alleles and maps to 524 oligo probes.

Gene

This transcript is a product of gene ENSG00000159840.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322764.5	ZYX-001	2493	572aa	ENSP00000324422.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5883	B4DQX7 C9IZ41 Q15942	NM_003461.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392910.2	ZYX-007	2123	415aa	ENSP00000376642.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQX7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354434.4	ZYX-006	2050	540aa	ENSP00000346417.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQR8 H0Y2Y8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449423.2	ZYX-201	2050	485aa	ENSP00000394158.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQR8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446634.1	ZYX-003	926	171aa	ENSP00000403714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJK5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000457235.1	ZYX-010	703	164aa	ENSP00000400537.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ41	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000449630.1	ZYX-005	533	177aa	ENSP00000413467.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3R3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000436448.1	ZYX-009	632	176aa	ENSP00000411230.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000477373.1	ZYX-008	504	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468083.1	ZYX-002	1146	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497119.1	ZYX-004	560	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 2,123 bps, Translation length: 415 residues

Version

ENST00000392910.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000342164 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000392910.2 ZYX-007

Summary