Human (GRCh37.p13)
Description

SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:17028]

Gene Synonyms

Dot3, EAP30, VPS22

Location
About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 5067 variant alleles and maps to 360 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000502492.1SNF8-0012319258aaENSP00000421380.1
 
Protein coding
CCDS11541D6RJ86 Q96H20 -GENCODE basic
ENST00000290330.3SNF8-002951257aaENSP00000290330.3
 
Protein coding
D6RJ86 Q96H20 NM_007241.2GENCODE basic
ENST00000510558.2SNF8-0061051167aaENSP00000421390.2
 
Nonsense mediated decay
D6RFY6 D6RJ86 --
ENST00000514929.1SNF8-004775141aaENSP00000427328.1
 
Nonsense mediated decay
D6RJ86 --
ENST00000507302.2SNF8-007742103aaENSP00000422701.1
 
Nonsense mediated decay
D6RBI1 --
ENST00000576353.1SNF8-01670053aaENSP00000460001.1
 
Nonsense mediated decay
I3L2X5 --
ENST00000509989.1SNF8-01167716aaENSP00000467548.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000573795.1SNF8-01758336aaENSP00000460981.1
 
Nonsense mediated decay
I3L457 --
ENST00000509995.1SNF8-00856081aaENSP00000421956.1
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000514089.1SNF8-015571No protein-
 
Processed transcript
---
ENST00000504000.1SNF8-0031899No protein-
 
Retained intron
---
ENST00000512243.1SNF8-009863No protein-
 
Retained intron
---
ENST00000515174.1SNF8-010823No protein-
 
Retained intron
---
ENST00000515572.1SNF8-012687No protein-
 
Retained intron
---
ENST00000506104.1SNF8-014455No protein-
 
Retained intron
---
ENST00000510195.1SNF8-005445No protein-
 
Retained intron
---
ENST00000511214.1SNF8-013429No protein-
 
Retained intron
---
Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,319 bps, Translation length: 258 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11541

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96H20

Version

ENST00000502492.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000361172 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.