Transcript: ENST00000505065.1 CDC42SE2-005

Description

CDC42 small effector 2 [Source:HGNC Symbol;Acc:18547]

Gene Synonyms

FLJ21967, SPEC2

Location

Chromosome 5: 130,599,793-130,730,360 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 62075 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000158985.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000505065.1	CDC42SE2-005	4352	84aa	ENSP00000427421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34224	D6REL0 Q9NRR3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000360515.3	CDC42SE2-002	3591	84aa	ENSP00000353706.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34224	D6REL0 Q9NRR3	NM_020240.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395246.1	CDC42SE2-201	3485	84aa	ENSP00000378667.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34224	D6REL0 Q9NRR3	NM_001038702.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503291.1	CDC42SE2-001	2025	57aa	ENSP00000426779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REL0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502582.1	CDC42SE2-011	277	54aa	ENSP00000425292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9W5	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000504701.1	CDC42SE2-010	567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515533.1	CDC42SE2-008	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502840.1	CDC42SE2-006	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502639.1	CDC42SE2-004	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506419.1	CDC42SE2-009	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506929.1	CDC42SE2-003	410	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511432.1	CDC42SE2-007	286	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 4,352 bps, Translation length: 84 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NRR3

CCDS

This transcript is a member of the Human CCDS set: CCDS34224

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENST00000505065.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000370104 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000505065.1 CDC42SE2-005

Summary