Transcript: ENST00000569435.1 ZC3H18-007

Description

zinc finger CCCH-type containing 18 [Source:HGNC Symbol;Acc:25091]

Gene Synonyms

NHN1

Location

Chromosome 16: 88,636,886-88,666,210 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 11254 variant alleles and maps to 130 oligo probes.

Gene

This transcript is a product of gene ENSG00000158545.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301011.5	ZC3H18-001	3729	953aa	ENSP00000301011.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10967	B3KRL4 H3BRH3 Q86VM9	NM_144604.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452588.2	ZC3H18-002	3211	977aa	ENSP00000416951.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KRL4 E7ERS3 H3BRH3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000565583.1	ZC3H18-013	1068	196aa	ENSP00000456241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRH3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567085.1	ZC3H18-009	712	238aa	ENSP00000455083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000569435.1	ZC3H18-007	694	197aa	ENSP00000455260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPD0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564341.1	ZC3H18-014	387	75aa	ENSP00000456334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRN6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564161.1	ZC3H18-004	4654	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566496.1	ZC3H18-005	1949	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566317.1	ZC3H18-011	628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566660.1	ZC3H18-012	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000563382.1	ZC3H18-010	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568072.1	ZC3H18-008	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 694 bps, Translation length: 197 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000569435.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000422469 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000569435.1 ZC3H18-007

Summary