Transcript: ENST00000336665.5 AGAP1-002

Description

ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:16922]

Gene Synonyms

AGAP-1, CENTG2, GGAP1, KIAA1099, cnt-g2

Location

Chromosome 2: 236,402,751-237,035,198 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 32 domains and features, is associated with 309565 variant alleles and maps to 780 oligo probes.

Gene

This transcript is a product of gene ENSG00000157985.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000304032.8	AGAP1-001	10832	857aa	ENSP00000307634.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33408	F5GXM9 Q4ZG22 Q4ZG54 Q53S93 Q9UPQ3	NM_001037131.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409538.1	AGAP1-004	6138	1069aa	ENSP00000386897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUN2 Q4ZG22 Q53RW1 Q53S93	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000336665.5	AGAP1-002	5427	804aa	ENSP00000338378.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2514	Q4ZG22 Q4ZG54 Q53RW1 Q53S93 Q9UPQ3	NM_014914.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428334.2	AGAP1-201	2665	696aa	ENSP00000411824.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXM9 Q4ZG22	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409457.1	AGAP1-003	2165	405aa	ENSP00000387174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58756	Q4ZG54 Q53S93 Q9UPQ3	NM_001244888.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453371.1	AGAP1-005	2138	259aa	ENSP00000413756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000418654.1	AGAP1-007	826	276aa	ENSP00000393838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000448025.1	AGAP1-010	757	253aa	ENSP00000403482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000402604.2	AGAP1-006	563	117aa	ENSP00000385492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J8Z2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482882.1	AGAP1-009	864	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466575.1	AGAP1-008	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 5,427 bps, Translation length: 804 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPQ3

CCDS

This transcript is a member of the Human CCDS set: CCDS2514

Version

ENST00000336665.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257077 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000336665.5 AGAP1-002

Summary