Transcript: ENST00000435556.3 PANK4-008

Description

pantothenate kinase 4 [Source:HGNC Symbol;Acc:19366]

Gene Synonyms

FLJ10782

Location

Chromosome 1: 2,439,976-2,458,035 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 11 domains and features, is associated with 11155 variant alleles and maps to 505 oligo probes.

Gene

This transcript is a product of gene ENSG00000157881.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000378466.3	PANK4-001	2649	773aa	ENSP00000367727.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42	Q9NVE7	NM_018216.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435556.3	PANK4-008	2524	734aa	ENSP00000421433.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHT6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505228.1	PANK4-009	1913	473aa	ENSP00000425932.1	Nonsense mediated decay		H0Y9E4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502770.1	PANK4-007	1041	151aa	ENSP00000425674.1	Nonsense mediated decay		D6RJF3	-	-
ENST00000486396.1	PANK4-005	879	41aa	ENSP00000425668.1	Nonsense mediated decay		H0YA02	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000502512.1	PANK4-012	706	136aa	ENSP00000423920.1	Nonsense mediated decay		H0Y9E4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000468002.2	PANK4-004	670	190aa	ENSP00000425977.1	Nonsense mediated decay		H0YA31	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491212.1	PANK4-006	725	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471361.1	PANK4-003	722	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487804.1	PANK4-002	718	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514922.1	PANK4-010	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515423.1	PANK4-011	430	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 2,524 bps, Translation length: 734 residues

Version

ENST00000435556.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366428 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000435556.3 PANK4-008

Summary